Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 UBALD1-205ENST00000590891 2641 ntBASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 OR6D1P-203ENST00000641209 4860 ntBASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AC023274.1-201ENST00000418278 595 ntBASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 AC007064.4-201ENST00000637740 555 ntBASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH20Q8N6Y1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AL118508.1-201ENST00000613502 2345 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 LINC02012-201ENST00000608206 1725 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 YBX2P1-201ENST00000394192 760 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 DNAJB3-201ENST00000446806 729 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AC107918.2-201ENST00000530817 355 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AC023141.13-201ENST00000604991 943 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 ACTL9-202ENST00000612068 1252 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AC004877.2-201ENST00000623941 599 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
PCDH20Q8N6Y1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 BCAR1-209ENST00000546196 1340 ntBASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AC018695.7-201ENST00000624587 2492 ntBASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 MTDHP5-201ENST00000598980 586 ntBASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 REXO1L3P-201ENST00000622202 1288 ntBASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDH20Q8N6Y1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms