Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 PMS2P4-201ENST00000412466 1052 ntBASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AP006288.1-201ENST00000446065 395 ntBASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AC112191.1-201ENST00000523689 701 ntBASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AP002490.2-201ENST00000524791 560 ntBASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ARHGEF39Q8N4T4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 AC078925.2-201ENST00000624013 1973 ntBASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 AL355306.1-201ENST00000415580 579 ntBASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 GPALPP1-207ENST00000611650 899 ntBASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 AC134684.3-201ENST00000641758 218 ntBASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ARHGEF39Q8N4T4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 KRT8P39-201ENST00000396270 1433 ntBASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ARHGEF39Q8N4T4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms