Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PGBD3Q8N328 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PGBD3Q8N328 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PGBD3Q8N328 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
PGBD3Q8N328 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PGBD3Q8N328 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PGBD3Q8N328 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
PGBD3Q8N328 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PGBD3Q8N328 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PGBD3Q8N328 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC067863.1-201ENST00000494933 530 ntBASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC093214.1-201ENST00000511688 1107 ntBASIC17.14■□□□□ 0.33
PGBD3Q8N328 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC005498.2-205ENST00000593218 784 ntBASIC17.14■□□□□ 0.33
PGBD3Q8N328 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 AC009093.7-201ENST00000623853 1223 ntBASIC17.14■□□□□ 0.33
PGBD3Q8N328 Z92544.3-201ENST00000624747 417 ntBASIC17.14■□□□□ 0.33
PGBD3Q8N328 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PGBD3Q8N328 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.14■□□□□ 0.33
PGBD3Q8N328 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AL035633.1-201ENST00000406139 838 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 ADH5P3-201ENST00000433842 1137 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 RN7SL589P-201ENST00000481268 310 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AC079140.1-201ENST00000508039 487 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AC093520.2-201ENST00000561830 333 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 MIR4515-201ENST00000584082 81 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AC099522.2-201ENST00000607001 744 ntBASIC17.13■□□□□ 0.33
PGBD3Q8N328 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PGBD3Q8N328 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PGBD3Q8N328 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PGBD3Q8N328 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 IGHV3-62-201ENST00000520057 340 ntBASIC17.12■□□□□ 0.33
PGBD3Q8N328 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.12■□□□□ 0.33
PGBD3Q8N328 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms