Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 LTB4R2-202ENST00000528054 3092 ntBASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 TFAMP1-201ENST00000412727 736 ntBASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 DNAJB3-202ENST00000449667 1266 ntBASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 HLA-J-202ENST00000469281 1241 ntBASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.42■□□□□ 0.38
BHLHA9Q7RTU4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AC020916.1-201ENST00000587762 1774 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 WASH6P-202ENST00000359512 1437 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AP001160.2-201ENST00000596071 487 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AC026120.1-201ENST00000611536 926 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AL161645.1-201ENST00000622716 1255 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 UBALD1-205ENST00000590891 2641 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AC092171.3-201ENST00000610122 2651 ntBASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BHLHA9Q7RTU4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AC004461.1-201ENST00000412461 403 ntBASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AC093520.2-201ENST00000561830 333 ntBASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 LINC01225-203ENST00000563550 1244 ntBASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.4■□□□□ 0.38
BHLHA9Q7RTU4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.39■□□□□ 0.38
BHLHA9Q7RTU4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BHLHA9Q7RTU4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.39■□□□□ 0.37
BHLHA9Q7RTU4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms