Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST2H3AQ71DI3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 KRT18P27-201ENST00000427733 1299 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 DUSP5P1-201ENST00000441325 1139 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 AC006557.2-201ENST00000592985 1240 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 AC013467.2-201ENST00000605472 835 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 AL805961.1-202ENST00000641562 540 ntBASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST2H3AQ71DI3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms