Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NUP188Q5SRE5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
NUP188Q5SRE5 RN7SL828P-201ENST00000607615 303 ntBASIC21.49■■□□□ 1.03
NUP188Q5SRE5 RPSAP52-203ENST00000622976 1023 ntBASIC21.49■■□□□ 1.03
NUP188Q5SRE5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 MIR1247-201ENST00000408206 136 ntBASIC21.48■■□□□ 1.03
NUP188Q5SRE5 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 AL079307.3-201ENST00000556114 283 ntBASIC21.48■■□□□ 1.03
NUP188Q5SRE5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.48■■□□□ 1.03
NUP188Q5SRE5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUP188Q5SRE5 AC093525.9-201ENST00000624961 1746 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 PRYP6-201ENST00000514804 343 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 ZNF767P-206ENST00000513792 565 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC023310.3-201ENST00000557027 670 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC100756.1-201ENST00000562736 682 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC138749.3-201ENST00000567691 622 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 AC116165.1-201ENST00000611806 668 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 WFDC1-204ENST00000613603 549 ntBASIC21.46■■□□□ 1.03
NUP188Q5SRE5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NUP188Q5SRE5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 AC016396.2-201ENST00000562575 1417 ntBASIC21.45■■□□□ 1.02
NUP188Q5SRE5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 TUBB1P2-201ENST00000422712 1306 ntBASIC21.45■■□□□ 1.02
NUP188Q5SRE5 TUBB1P1-201ENST00000503144 1300 ntBASIC21.45■■□□□ 1.02
NUP188Q5SRE5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 BOLA2P3-201ENST00000404566 256 ntBASIC21.45■■□□□ 1.02
NUP188Q5SRE5 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 FRMD8P1-201ENST00000440433 1524 ntBASIC21.45■■□□□ 1.02
NUP188Q5SRE5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUP188Q5SRE5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms