Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USH1GQ495M9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
USH1GQ495M9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
USH1GQ495M9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.34■□□□□ 0.69
USH1GQ495M9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.34■□□□□ 0.69
USH1GQ495M9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
USH1GQ495M9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 AC060834.1-201ENST00000443027 2032 ntBASIC19.34■□□□□ 0.69
USH1GQ495M9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
USH1GQ495M9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USH1GQ495M9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.33■□□□□ 0.69
USH1GQ495M9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.33■□□□□ 0.69
USH1GQ495M9 AC012313.1-201ENST00000593393 3059 ntBASIC19.33■□□□□ 0.69
USH1GQ495M9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
USH1GQ495M9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USH1GQ495M9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.33■□□□□ 0.69
USH1GQ495M9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USH1GQ495M9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USH1GQ495M9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
USH1GQ495M9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
USH1GQ495M9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USH1GQ495M9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USH1GQ495M9 TFAMP1-201ENST00000412727 736 ntBASIC19.33■□□□□ 0.68
USH1GQ495M9 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.33■□□□□ 0.68
USH1GQ495M9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.33■□□□□ 0.68
USH1GQ495M9 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.33■□□□□ 0.68
USH1GQ495M9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USH1GQ495M9 CYP2A7P1-201ENST00000595391 815 ntBASIC19.33■□□□□ 0.68
USH1GQ495M9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
USH1GQ495M9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.33■□□□□ 0.68
USH1GQ495M9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.33■□□□□ 0.68
USH1GQ495M9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USH1GQ495M9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USH1GQ495M9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
USH1GQ495M9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.32■□□□□ 0.68
USH1GQ495M9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 RARRES2P8-201ENST00000566335 367 ntBASIC19.32■□□□□ 0.68
USH1GQ495M9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.32■□□□□ 0.68
USH1GQ495M9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
USH1GQ495M9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.32■□□□□ 0.68
USH1GQ495M9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
USH1GQ495M9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USH1GQ495M9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.32■□□□□ 0.68
USH1GQ495M9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
USH1GQ495M9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms