Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AL031731.1-201ENST00000642131 2094 ntBASIC21.91■■□□□ 1.1
CCDC27Q2M243 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.91■■□□□ 1.1
CCDC27Q2M243 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC27Q2M243 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC27Q2M243 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 AL031055.1-201ENST00000606362 631 ntBASIC21.9■■□□□ 1.1
CCDC27Q2M243 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC27Q2M243 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC27Q2M243 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC27Q2M243 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CCDC27Q2M243 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.89■■□□□ 1.1
CCDC27Q2M243 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC27Q2M243 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.89■■□□□ 1.1
CCDC27Q2M243 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CCDC27Q2M243 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC27Q2M243 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC27Q2M243 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC27Q2M243 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 AC074386.1-202ENST00000463561 864 ntBASIC21.89■■□□□ 1.09
CCDC27Q2M243 AC040169.1-201ENST00000565382 521 ntBASIC21.89■■□□□ 1.09
CCDC27Q2M243 AL009183.1-201ENST00000603760 355 ntBASIC21.89■■□□□ 1.09
CCDC27Q2M243 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.89■■□□□ 1.09
CCDC27Q2M243 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC27Q2M243 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC27Q2M243 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 GGT3P-204ENST00000453783 1664 ntBASIC21.88■■□□□ 1.09
CCDC27Q2M243 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC27Q2M243 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.88■■□□□ 1.09
CCDC27Q2M243 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC27Q2M243 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC27Q2M243 AC092474.2-201ENST00000424288 719 ntBASIC21.88■■□□□ 1.09
CCDC27Q2M243 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC27Q2M243 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms