Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 FAM197Y1-201ENST00000421178 764 ntBASIC13.33□□□□□ -0.28
CCL20P78556 PVRIG2P-201ENST00000435460 978 ntBASIC13.33□□□□□ -0.28
CCL20P78556 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 NUDT16P1-203ENST00000513809 620 ntBASIC13.33□□□□□ -0.28
CCL20P78556 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 RN7SL471P-201ENST00000580476 299 ntBASIC13.33□□□□□ -0.28
CCL20P78556 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL20P78556 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCL20P78556 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 GPR89P-201ENST00000407924 1495 ntBASIC13.32□□□□□ -0.28
CCL20P78556 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.32□□□□□ -0.28
CCL20P78556 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL20P78556 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL20P78556 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL20P78556 MIR3917-201ENST00000580971 93 ntBASIC13.32□□□□□ -0.28
CCL20P78556 AC009154.2-201ENST00000621177 724 ntBASIC13.32□□□□□ -0.28
CCL20P78556 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 AC106881.1-201ENST00000605849 3329 ntBASIC13.32□□□□□ -0.28
CCL20P78556 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCL20P78556 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL20P78556 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.32□□□□□ -0.28
CCL20P78556 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL20P78556 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL20P78556 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL20P78556 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL20P78556 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL20P78556 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms