Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RPL13AP23-201ENST00000480739 586 ntBASIC16.48■□□□□ 0.23
YBX1P67809 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.48■□□□□ 0.23
YBX1P67809 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.48■□□□□ 0.23
YBX1P67809 BX640515.1-201ENST00000617215 977 ntBASIC16.48■□□□□ 0.23
YBX1P67809 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.48■□□□□ 0.23
YBX1P67809 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.48■□□□□ 0.23
YBX1P67809 AC004790.2-201ENST00000623588 572 ntBASIC16.48■□□□□ 0.23
YBX1P67809 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.48■□□□□ 0.23
YBX1P67809 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
YBX1P67809 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YBX1P67809 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YBX1P67809 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 AL391005.1-201ENST00000623953 2435 ntBASIC16.47■□□□□ 0.23
YBX1P67809 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 AC026691.1-201ENST00000602502 2017 ntBASIC16.47■□□□□ 0.23
YBX1P67809 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 AP002414.1-201ENST00000391405 1147 ntBASIC16.47■□□□□ 0.23
YBX1P67809 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
YBX1P67809 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
YBX1P67809 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
YBX1P67809 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.47■□□□□ 0.23
YBX1P67809 OR7E47P-204ENST00000575924 449 ntBASIC16.47■□□□□ 0.23
YBX1P67809 AC008667.4-201ENST00000607370 168 ntBASIC16.47■□□□□ 0.23
YBX1P67809 AC005593.1-201ENST00000624894 515 ntBASIC16.47■□□□□ 0.23
YBX1P67809 AF228730.7-201ENST00000641842 219 ntBASIC16.47■□□□□ 0.23
YBX1P67809 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.47■□□□□ 0.23
YBX1P67809 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.47■□□□□ 0.23
YBX1P67809 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.47■□□□□ 0.23
YBX1P67809 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YBX1P67809 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.46■□□□□ 0.23
YBX1P67809 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
YBX1P67809 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.46■□□□□ 0.23
YBX1P67809 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.46■□□□□ 0.23
YBX1P67809 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.46■□□□□ 0.23
YBX1P67809 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 SLC25A6P2-201ENST00000497974 877 ntBASIC16.46■□□□□ 0.23
YBX1P67809 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.46■□□□□ 0.23
YBX1P67809 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.46■□□□□ 0.23
YBX1P67809 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YBX1P67809 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.46■□□□□ 0.23
YBX1P67809 DUX4L17-201ENST00000557360 1267 ntBASIC16.46■□□□□ 0.23
YBX1P67809 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.46■□□□□ 0.23
YBX1P67809 AC034105.1-201ENST00000563488 319 ntBASIC16.46■□□□□ 0.23
YBX1P67809 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
YBX1P67809 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms