Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.26■□□□□ 0.03
RPS4XP62701 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 MIR940-201ENST00000401276 94 ntBASIC15.26■□□□□ 0.03
RPS4XP62701 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.26■□□□□ 0.03
RPS4XP62701 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.26■□□□□ 0.03
RPS4XP62701 AL139011.1-202ENST00000642063 584 ntBASIC15.26■□□□□ 0.03
RPS4XP62701 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RPS4XP62701 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RPS4XP62701 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 AC006449.5-201ENST00000610658 2098 ntBASIC15.26■□□□□ 0.03
RPS4XP62701 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
RPS4XP62701 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPS4XP62701 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
RPS4XP62701 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 AC006538.1-201ENST00000567905 1585 ntBASIC15.25■□□□□ 0.03
RPS4XP62701 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 HNRNPDP1-201ENST00000439535 754 ntBASIC15.25■□□□□ 0.03
RPS4XP62701 PAWRP1-201ENST00000451083 565 ntBASIC15.25■□□□□ 0.03
RPS4XP62701 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.25■□□□□ 0.03
RPS4XP62701 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.25■□□□□ 0.03
RPS4XP62701 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 AC116407.3-201ENST00000623905 1129 ntBASIC15.25■□□□□ 0.03
RPS4XP62701 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.25■□□□□ 0.03
RPS4XP62701 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.25■□□□□ 0.03
RPS4XP62701 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPS4XP62701 AC006277.1-201ENST00000624348 1610 ntBASIC15.25■□□□□ 0.03
RPS4XP62701 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.24■□□□□ 0.03
RPS4XP62701 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS4XP62701 MIR1233-2-201ENST00000408138 82 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 MIR1233-1-201ENST00000408722 82 ntBASIC15.24■□□□□ 0.03
RPS4XP62701 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.24■□□□□ 0.03
RPS4XP62701 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.24■□□□□ 0.03
RPS4XP62701 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS4XP62701 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms