Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP4BP1P59074 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 KRT19P2-202ENST00000557173 1012 ntBASIC19.34■□□□□ 0.69
CHMP4BP1P59074 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AC106028.4-201ENST00000614509 607 ntBASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP4BP1P59074 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHMP4BP1P59074 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 FAM58CP-201ENST00000435741 640 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 YBX1P5-201ENST00000509441 847 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 GGTLC5P-201ENST00000617623 998 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 ELL2P1-201ENST00000413990 1906 ntBASIC19.33■□□□□ 0.68
CHMP4BP1P59074 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CHMP4BP1P59074 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 MYCLP1-201ENST00000372451 1075 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AC254562.1-201ENST00000417586 456 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AC002558.1-201ENST00000488906 803 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 PDPK2P-202ENST00000562415 1191 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AL031432.2-201ENST00000566714 459 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AL928711.1-201ENST00000570165 459 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 OR7E47P-204ENST00000575924 449 ntBASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms