Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN6P56747 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN6P56747 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN6P56747 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN6P56747 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN6P56747 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 SPDYE22P-201ENST00000582158 798 ntBASIC16.17■□□□□ 0.18
CLDN6P56747 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN6P56747 AC012317.2-201ENST00000623305 2251 ntBASIC16.17■□□□□ 0.18
CLDN6P56747 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN6P56747 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN6P56747 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN6P56747 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN6P56747 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 SLC22A20-204ENST00000530038 1673 ntBASIC16.16■□□□□ 0.18
CLDN6P56747 COX5BP8-201ENST00000416911 349 ntBASIC16.16■□□□□ 0.18
CLDN6P56747 NME2P1-201ENST00000426182 414 ntBASIC16.16■□□□□ 0.18
CLDN6P56747 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN6P56747 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN6P56747 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.16■□□□□ 0.18
CLDN6P56747 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN6P56747 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CLDN6P56747 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN6P56747 SPDYE12P-201ENST00000618416 771 ntBASIC16.16■□□□□ 0.18
CLDN6P56747 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN6P56747 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN6P56747 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN6P56747 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN6P56747 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 PCDHB18P-201ENST00000524813 2368 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 FZD10-202ENST00000539839 3282 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CLDN6P56747 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN6P56747 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN6P56747 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN6P56747 TSSK5P-201ENST00000423978 907 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN6P56747 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN6P56747 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN6P56747 AC109635.5-201ENST00000533593 962 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN6P56747 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN6P56747 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN6P56747 AL031055.1-201ENST00000606362 631 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 AL590560.3-201ENST00000623350 461 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 AC008267.7-201ENST00000624570 1194 ntBASIC16.15■□□□□ 0.18
CLDN6P56747 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms