Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HCFC1P51610 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HCFC1P51610 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.63□□□□□ -0.07
HCFC1P51610 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 PIN1P1-201ENST00000412108 996 ntBASIC14.63□□□□□ -0.07
HCFC1P51610 COX5BP8-201ENST00000416911 349 ntBASIC14.63□□□□□ -0.07
HCFC1P51610 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.63□□□□□ -0.07
HCFC1P51610 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.63□□□□□ -0.07
HCFC1P51610 AC009118.2-201ENST00000613275 655 ntBASIC14.63□□□□□ -0.07
HCFC1P51610 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.63□□□□□ -0.07
HCFC1P51610 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.63□□□□□ -0.07
HCFC1P51610 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HCFC1P51610 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HCFC1P51610 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 AC016027.1-202ENST00000607927 1699 ntBASIC14.62□□□□□ -0.07
HCFC1P51610 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HCFC1P51610 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 AL596325.1-201ENST00000563991 1082 ntBASIC14.62□□□□□ -0.07
HCFC1P51610 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HCFC1P51610 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
HCFC1P51610 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HCFC1P51610 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HCFC1P51610 AC108860.2-201ENST00000562760 2183 ntBASIC14.62□□□□□ -0.07
HCFC1P51610 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HCFC1P51610 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 FAM220BP-201ENST00000377689 816 ntBASIC14.61□□□□□ -0.07
HCFC1P51610 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 AL358472.5-202ENST00000641448 1267 ntBASIC14.61□□□□□ -0.07
HCFC1P51610 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 AC080080.1-201ENST00000625121 2420 ntBASIC14.61□□□□□ -0.07
HCFC1P51610 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.61□□□□□ -0.07
HCFC1P51610 EGFEM1P-202ENST00000431685 1563 ntBASIC14.61□□□□□ -0.07
HCFC1P51610 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HCFC1P51610 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HCFC1P51610 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.61□□□□□ -0.07
HCFC1P51610 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.61□□□□□ -0.07
HCFC1P51610 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.61□□□□□ -0.07
HCFC1P51610 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HCFC1P51610 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HCFC1P51610 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HCFC1P51610 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms