Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE6CP51160 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.28■□□□□ 0.52
PDE6CP51160 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.28■□□□□ 0.52
PDE6CP51160 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 AL356488.2-201ENST00000602755 427 ntBASIC18.28■□□□□ 0.52
PDE6CP51160 FAM197Y3-203ENST00000618346 717 ntBASIC18.28■□□□□ 0.52
PDE6CP51160 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PDE6CP51160 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PDE6CP51160 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE6CP51160 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE6CP51160 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDE6CP51160 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PDE6CP51160 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PDE6CP51160 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDE6CP51160 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.27■□□□□ 0.52
PDE6CP51160 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE6CP51160 KRT18P27-201ENST00000427733 1299 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 AC136632.2-201ENST00000512891 861 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 RNA5SP415-201ENST00000517246 115 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE6CP51160 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PDE6CP51160 AL353135.1-201ENST00000606729 504 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 GPALPP1-207ENST00000611650 899 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.27■□□□□ 0.52
PDE6CP51160 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.27■□□□□ 0.52
PDE6CP51160 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.27■□□□□ 0.52
PDE6CP51160 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDE6CP51160 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PDE6CP51160 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6CP51160 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6CP51160 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.27■□□□□ 0.51
PDE6CP51160 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDE6CP51160 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PDE6CP51160 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 TUBB8P12-201ENST00000308911 1335 ntBASIC18.26■□□□□ 0.51
PDE6CP51160 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 TUBB7P-202ENST00000428444 1305 ntBASIC18.26■□□□□ 0.51
PDE6CP51160 TUBB8P7-204ENST00000567960 1332 ntBASIC18.26■□□□□ 0.51
PDE6CP51160 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDE6CP51160 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PDE6CP51160 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.26■□□□□ 0.51
PDE6CP51160 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.26■□□□□ 0.51
PDE6CP51160 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDE6CP51160 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.26■□□□□ 0.51
PDE6CP51160 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDE6CP51160 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDE6CP51160 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDE6CP51160 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.26■□□□□ 0.51
PDE6CP51160 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDE6CP51160 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.26■□□□□ 0.51
PDE6CP51160 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6CP51160 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6CP51160 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms