Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.99■□□□□ 0.63
TM4SF4P48230 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF4P48230 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TM4SF4P48230 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.98■□□□□ 0.63
TM4SF4P48230 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF4P48230 SLC25A1P3-201ENST00000395415 828 ntBASIC18.98■□□□□ 0.63
TM4SF4P48230 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.98■□□□□ 0.63
TM4SF4P48230 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 SLC25A47P1-201ENST00000531577 414 ntBASIC18.98■□□□□ 0.63
TM4SF4P48230 AC024267.1-201ENST00000582320 895 ntBASIC18.98■□□□□ 0.63
TM4SF4P48230 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.98■□□□□ 0.63
TM4SF4P48230 AC026979.3-201ENST00000607315 403 ntBASIC18.98■□□□□ 0.63
TM4SF4P48230 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF4P48230 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF4P48230 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TM4SF4P48230 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.98■□□□□ 0.63
TM4SF4P48230 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF4P48230 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
TM4SF4P48230 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 ELK2AP-201ENST00000392510 1007 ntBASIC18.97■□□□□ 0.63
TM4SF4P48230 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 AC099336.1-201ENST00000417053 1171 ntBASIC18.97■□□□□ 0.63
TM4SF4P48230 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 RARRES2P5-201ENST00000564013 466 ntBASIC18.97■□□□□ 0.63
TM4SF4P48230 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF4P48230 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF4P48230 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF4P48230 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 AC108860.2-201ENST00000562760 2183 ntBASIC18.96■□□□□ 0.63
TM4SF4P48230 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 CSF2RBP1-201ENST00000447905 391 ntBASIC18.96■□□□□ 0.63
TM4SF4P48230 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF4P48230 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF4P48230 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF4P48230 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF4P48230 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF4P48230 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.96■□□□□ 0.63
TM4SF4P48230 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 AL139099.5-201ENST00000635274 300 ntBASIC18.96■□□□□ 0.63
TM4SF4P48230 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF4P48230 AC093525.9-201ENST00000624961 1746 ntBASIC18.96■□□□□ 0.63
TM4SF4P48230 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF4P48230 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TM4SF4P48230 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF4P48230 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.96■□□□□ 0.63
TM4SF4P48230 CLK3P2-201ENST00000427566 1453 ntBASIC18.96■□□□□ 0.63
TM4SF4P48230 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF4P48230 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.96■□□□□ 0.63
TM4SF4P48230 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF4P48230 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.95■□□□□ 0.62
TM4SF4P48230 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.95■□□□□ 0.62
TM4SF4P48230 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TM4SF4P48230 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.95■□□□□ 0.62
TM4SF4P48230 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF4P48230 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.95■□□□□ 0.62
TM4SF4P48230 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.95■□□□□ 0.62
TM4SF4P48230 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF4P48230 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TM4SF4P48230 AC108725.1-201ENST00000495472 409 ntBASIC18.95■□□□□ 0.62
TM4SF4P48230 AC104596.2-201ENST00000512793 793 ntBASIC18.95■□□□□ 0.62
TM4SF4P48230 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF4P48230 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms