Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC009078.2-202ENST00000463353 338 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 AC108751.1-201ENST00000490852 363 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 AP001005.1-201ENST00000571755 1248 ntBASIC16.27■□□□□ 0.2
SLC6A12P48065 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC6A12P48065 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC6A12P48065 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A12P48065 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC6A12P48065 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC6A12P48065 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC6A12P48065 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC6A12P48065 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC6A12P48065 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SLC6A12P48065 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
SLC6A12P48065 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC6A12P48065 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC6A12P48065 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC6A12P48065 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC6A12P48065 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A12P48065 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC6A12P48065 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 ALOX12P2-203ENST00000570921 1945 ntBASIC16.26■□□□□ 0.19
SLC6A12P48065 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SLC6A12P48065 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
SLC6A12P48065 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 IGHV3-22-201ENST00000520721 359 ntBASIC16.26■□□□□ 0.19
SLC6A12P48065 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A12P48065 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC6A12P48065 AC087641.1-201ENST00000557561 1021 ntBASIC16.26■□□□□ 0.19
SLC6A12P48065 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 ACTL9-202ENST00000612068 1252 ntBASIC16.26■□□□□ 0.19
SLC6A12P48065 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A12P48065 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A12P48065 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 GGT3P-204ENST00000453783 1664 ntBASIC16.26■□□□□ 0.19
SLC6A12P48065 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC6A12P48065 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC6A12P48065 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC6A12P48065 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 HLA-A-201ENST00000376802 1334 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A12P48065 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SLC6A12P48065 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A12P48065 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 FAM185BP-201ENST00000443595 716 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 AC009947.1-201ENST00000444350 727 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 AC093909.1-201ENST00000504731 1122 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A12P48065 UNC93B6-202ENST00000528242 690 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.25■□□□□ 0.19
SLC6A12P48065 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC6A12P48065 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SLC6A12P48065 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLC6A12P48065 GGT4P-201ENST00000623672 1708 ntBASIC16.25■□□□□ 0.19
SLC6A12P48065 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC6A12P48065 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms