Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 UXT-AS1-201ENST00000590504 1525 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 AC005332.8-201ENST00000622750 2735 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
BRCC3P46736 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.9■□□□□ 0.46
BRCC3P46736 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 GPS2P2-201ENST00000430745 888 ntBASIC17.9■□□□□ 0.46
BRCC3P46736 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
BRCC3P46736 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 MIR3909-201ENST00000579518 119 ntBASIC17.9■□□□□ 0.46
BRCC3P46736 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.9■□□□□ 0.46
BRCC3P46736 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.9■□□□□ 0.46
BRCC3P46736 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BRCC3P46736 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BRCC3P46736 AL671710.1-201ENST00000610245 2349 ntBASIC17.89■□□□□ 0.46
BRCC3P46736 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.89■□□□□ 0.46
BRCC3P46736 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
BRCC3P46736 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.89■□□□□ 0.45
BRCC3P46736 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.89■□□□□ 0.45
BRCC3P46736 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.89■□□□□ 0.45
BRCC3P46736 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.89■□□□□ 0.45
BRCC3P46736 Z92544.3-201ENST00000624747 417 ntBASIC17.89■□□□□ 0.45
BRCC3P46736 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
BRCC3P46736 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 PCDHB18P-201ENST00000524813 2368 ntBASIC17.89■□□□□ 0.45
BRCC3P46736 PCDHB17P-201ENST00000539533 2393 ntBASIC17.89■□□□□ 0.45
BRCC3P46736 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRCC3P46736 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
BRCC3P46736 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.88■□□□□ 0.45
BRCC3P46736 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.88■□□□□ 0.45
BRCC3P46736 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
BRCC3P46736 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.88■□□□□ 0.45
BRCC3P46736 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.88■□□□□ 0.45
BRCC3P46736 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.88■□□□□ 0.45
BRCC3P46736 RBPMS2P1-201ENST00000437762 623 ntBASIC17.88■□□□□ 0.45
BRCC3P46736 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.88■□□□□ 0.45
BRCC3P46736 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.88■□□□□ 0.45
BRCC3P46736 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.88■□□□□ 0.45
BRCC3P46736 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRCC3P46736 TUBB8P12-201ENST00000308911 1335 ntBASIC17.88■□□□□ 0.45
BRCC3P46736 TUBB7P-202ENST00000428444 1305 ntBASIC17.88■□□□□ 0.45
BRCC3P46736 TUBB8P7-204ENST00000567960 1332 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms