Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
RFC5P40937 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFC5P40937 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC5P40937 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFC5P40937 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.59■□□□□ 0.57
RFC5P40937 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.59■□□□□ 0.57
RFC5P40937 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.59■□□□□ 0.57
RFC5P40937 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC5P40937 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC5P40937 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.58■□□□□ 0.57
RFC5P40937 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RFC5P40937 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RFC5P40937 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC5P40937 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC5P40937 AC060834.1-201ENST00000443027 2032 ntBASIC18.58■□□□□ 0.56
RFC5P40937 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC5P40937 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.58■□□□□ 0.56
RFC5P40937 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.58■□□□□ 0.56
RFC5P40937 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
RFC5P40937 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RFC5P40937 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.58■□□□□ 0.56
RFC5P40937 AL596442.2-201ENST00000610240 980 ntBASIC18.58■□□□□ 0.56
RFC5P40937 AL513210.1-201ENST00000629608 234 ntBASIC18.58■□□□□ 0.56
RFC5P40937 AC105339.1-204ENST00000636249 355 ntBASIC18.58■□□□□ 0.56
RFC5P40937 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
RFC5P40937 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
RFC5P40937 AL139384.1-201ENST00000612143 3047 ntBASIC18.58■□□□□ 0.56
RFC5P40937 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
RFC5P40937 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RFC5P40937 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC5P40937 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RFC5P40937 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 AKAP8P1-201ENST00000434743 1349 ntBASIC18.57■□□□□ 0.56
RFC5P40937 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 CNN2P11-201ENST00000429351 262 ntBASIC18.57■□□□□ 0.56
RFC5P40937 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RFC5P40937 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 AC092183.1-201ENST00000469884 875 ntBASIC18.57■□□□□ 0.56
RFC5P40937 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 RARRES2P8-201ENST00000566335 367 ntBASIC18.57■□□□□ 0.56
RFC5P40937 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFC5P40937 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC5P40937 AC021097.1-201ENST00000607902 574 ntBASIC18.57■□□□□ 0.56
RFC5P40937 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC5P40937 AC026120.1-201ENST00000611536 926 ntBASIC18.57■□□□□ 0.56
RFC5P40937 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms