Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CTNNA1P35221 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 LINC00554-201ENST00000564841 3011 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 AC004817.3-201ENST00000602957 2129 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 MIR3180-1-201ENST00000580374 94 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 MIR3180-3-201ENST00000584616 94 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.89■□□□□ 0.45
CTNNA1P35221 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 AC007950.2-201ENST00000615045 2347 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CTNNA1P35221 IER3-202ENST00000376377 1350 ntBASIC17.89■□□□□ 0.45
CTNNA1P35221 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTNNA1P35221 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 AL513523.2-202ENST00000427283 2040 ntBASIC17.88■□□□□ 0.45
CTNNA1P35221 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CTNNA1P35221 POM121L3P-201ENST00000419331 1163 ntBASIC17.88■□□□□ 0.45
CTNNA1P35221 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.88■□□□□ 0.45
CTNNA1P35221 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.88■□□□□ 0.45
CTNNA1P35221 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.88■□□□□ 0.45
CTNNA1P35221 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 AC074051.2-201ENST00000565115 352 ntBASIC17.88■□□□□ 0.45
CTNNA1P35221 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 AC073592.4-201ENST00000623827 446 ntBASIC17.88■□□□□ 0.45
CTNNA1P35221 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 AL391256.1-201ENST00000443260 1855 ntBASIC17.88■□□□□ 0.45
CTNNA1P35221 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CTNNA1P35221 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTNNA1P35221 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.88■□□□□ 0.45
CTNNA1P35221 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.87■□□□□ 0.45
CTNNA1P35221 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.87■□□□□ 0.45
CTNNA1P35221 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTNNA1P35221 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.87■□□□□ 0.45
CTNNA1P35221 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTNNA1P35221 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.87■□□□□ 0.45
CTNNA1P35221 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTNNA1P35221 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.87■□□□□ 0.45
CTNNA1P35221 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms