Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA3P32297 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA3P32297 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA3P32297 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 AL031284.1-201ENST00000419297 478 ntBASIC17.84■□□□□ 0.45
CHRNA3P32297 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA3P32297 AC018712.1-201ENST00000455767 687 ntBASIC17.84■□□□□ 0.45
CHRNA3P32297 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA3P32297 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA3P32297 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.84■□□□□ 0.45
CHRNA3P32297 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA3P32297 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA3P32297 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA3P32297 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA3P32297 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CHRNA3P32297 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.83■□□□□ 0.45
CHRNA3P32297 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 PMPCAP1-201ENST00000508114 1576 ntBASIC17.83■□□□□ 0.45
CHRNA3P32297 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA3P32297 AL139384.1-201ENST00000612143 3047 ntBASIC17.83■□□□□ 0.45
CHRNA3P32297 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA3P32297 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA3P32297 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA3P32297 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA3P32297 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA3P32297 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.83■□□□□ 0.45
CHRNA3P32297 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA3P32297 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 STK19B-204ENST00000512515 211 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 RNA5SP419-201ENST00000515908 135 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 AC021087.4-201ENST00000563761 564 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHRNA3P32297 AL139288.1-201ENST00000623748 933 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA3P32297 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA3P32297 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CHRNA3P32297 PCDHB17P-201ENST00000539533 2393 ntBASIC17.83■□□□□ 0.44
CHRNA3P32297 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA3P32297 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA3P32297 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA3P32297 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA3P32297 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA3P32297 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHRNA3P32297 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHRNA3P32297 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA3P32297 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA3P32297 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA3P32297 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA3P32297 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms