Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.76■■□□□ 1.07
RXRBP28702 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.76■■□□□ 1.07
RXRBP28702 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.76■■□□□ 1.07
RXRBP28702 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.76■■□□□ 1.07
RXRBP28702 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RXRBP28702 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.75■■□□□ 1.07
RXRBP28702 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 REXO1L11P-201ENST00000620964 1927 ntBASIC21.75■■□□□ 1.07
RXRBP28702 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.75■■□□□ 1.07
RXRBP28702 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
RXRBP28702 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.75■■□□□ 1.07
RXRBP28702 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRBP28702 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.75■■□□□ 1.07
RXRBP28702 AC074044.1-201ENST00000609673 707 ntBASIC21.75■■□□□ 1.07
RXRBP28702 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RXRBP28702 AC008687.7-202ENST00000637404 953 ntBASIC21.75■■□□□ 1.07
RXRBP28702 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RXRBP28702 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RXRBP28702 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.75■■□□□ 1.07
RXRBP28702 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRBP28702 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RXRBP28702 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RXRBP28702 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.74■■□□□ 1.07
RXRBP28702 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RXRBP28702 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RXRBP28702 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
RXRBP28702 AC016694.1-201ENST00000434179 700 ntBASIC21.74■■□□□ 1.07
RXRBP28702 AC114501.1-201ENST00000445949 172 ntBASIC21.74■■□□□ 1.07
RXRBP28702 BX284668.4-201ENST00000453917 508 ntBASIC21.74■■□□□ 1.07
RXRBP28702 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RXRBP28702 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 CHMP4BP1-201ENST00000556017 588 ntBASIC21.74■■□□□ 1.07
RXRBP28702 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC21.74■■□□□ 1.07
RXRBP28702 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.74■■□□□ 1.07
RXRBP28702 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.74■■□□□ 1.07
RXRBP28702 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 AC073130.3-201ENST00000624389 2278 ntBASIC21.74■■□□□ 1.07
RXRBP28702 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 GRN-222ENST00000639447 1314 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRBP28702 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRBP28702 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RXRBP28702 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RXRBP28702 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.73■■□□□ 1.07
RXRBP28702 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RXRBP28702 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.73■■□□□ 1.07
RXRBP28702 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRBP28702 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRBP28702 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRBP28702 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRBP28702 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.73■■□□□ 1.07
RXRBP28702 MIR3619-201ENST00000579667 83 ntBASIC21.73■■□□□ 1.07
RXRBP28702 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
RXRBP28702 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.73■■□□□ 1.07
RXRBP28702 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.73■■□□□ 1.07
RXRBP28702 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC21.73■■□□□ 1.07
RXRBP28702 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC21.73■■□□□ 1.07
RXRBP28702 RHOXF1P1-202ENST00000635473 501 ntBASIC21.73■■□□□ 1.07
RXRBP28702 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms