Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 AC005412.3-201ENST00000580309 715 ntBASIC17.04■□□□□ 0.32
XPAP23025 ACTL9-202ENST00000612068 1252 ntBASIC17.04■□□□□ 0.32
XPAP23025 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.04■□□□□ 0.32
XPAP23025 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 FRMD8P1-201ENST00000440433 1524 ntBASIC17.04■□□□□ 0.32
XPAP23025 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
XPAP23025 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
XPAP23025 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 UPF3AP3-201ENST00000420996 769 ntBASIC17.03■□□□□ 0.32
XPAP23025 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 AC074386.1-202ENST00000463561 864 ntBASIC17.03■□□□□ 0.32
XPAP23025 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 AC107918.2-201ENST00000530817 355 ntBASIC17.03■□□□□ 0.32
XPAP23025 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.03■□□□□ 0.32
XPAP23025 PDPK2P-202ENST00000562415 1191 ntBASIC17.03■□□□□ 0.32
XPAP23025 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.03■□□□□ 0.32
XPAP23025 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 GPALPP1-207ENST00000611650 899 ntBASIC17.03■□□□□ 0.32
XPAP23025 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.03■□□□□ 0.32
XPAP23025 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.03■□□□□ 0.32
XPAP23025 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
XPAP23025 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
XPAP23025 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.03■□□□□ 0.32
XPAP23025 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.02■□□□□ 0.32
XPAP23025 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.02■□□□□ 0.32
XPAP23025 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
XPAP23025 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
XPAP23025 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.02■□□□□ 0.32
XPAP23025 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 MCCD1P2-201ENST00000423228 335 ntBASIC17.02■□□□□ 0.32
XPAP23025 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.02■□□□□ 0.32
XPAP23025 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.02■□□□□ 0.32
XPAP23025 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.02■□□□□ 0.32
XPAP23025 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
XPAP23025 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
XPAP23025 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XPAP23025 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
XPAP23025 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
XPAP23025 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
XPAP23025 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.02■□□□□ 0.31
XPAP23025 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
XPAP23025 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
XPAP23025 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
XPAP23025 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms