Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.53□□□□□ -0.08
CCL1P22362 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL1P22362 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.53□□□□□ -0.08
CCL1P22362 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 SCARNA2-201ENST00000458748 420 ntBASIC14.53□□□□□ -0.08
CCL1P22362 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCL1P22362 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL1P22362 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
CCL1P22362 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.53□□□□□ -0.08
CCL1P22362 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCL1P22362 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL1P22362 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL1P22362 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL1P22362 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL1P22362 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL1P22362 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL1P22362 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCL1P22362 GGT4P-201ENST00000623672 1708 ntBASIC14.52□□□□□ -0.08
CCL1P22362 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL1P22362 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL1P22362 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL1P22362 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCL1P22362 AL671710.1-201ENST00000610245 2349 ntBASIC14.52□□□□□ -0.08
CCL1P22362 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.52□□□□□ -0.08
CCL1P22362 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL1P22362 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL1P22362 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL1P22362 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL1P22362 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL1P22362 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL1P22362 LAGE3P1-201ENST00000425356 484 ntBASIC14.52□□□□□ -0.09
CCL1P22362 UPK3BP1-201ENST00000428678 509 ntBASIC14.52□□□□□ -0.09
CCL1P22362 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 SLC25A6P2-201ENST00000497974 877 ntBASIC14.52□□□□□ -0.09
CCL1P22362 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL1P22362 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 AC025062.2-201ENST00000605477 670 ntBASIC14.52□□□□□ -0.09
CCL1P22362 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCL1P22362 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL1P22362 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCL1P22362 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 PKD1P1-201ENST00000458669 6805 ntBASIC14.52□□□□□ -0.09
CCL1P22362 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL1P22362 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.52□□□□□ -0.09
CCL1P22362 AC131009.4-201ENST00000624048 1740 ntBASIC14.52□□□□□ -0.09
CCL1P22362 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL1P22362 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms