Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
BCKDHBP21953 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BCKDHBP21953 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
BCKDHBP21953 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 AC093525.9-201ENST00000624961 1746 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.57■□□□□ 0.24
BCKDHBP21953 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BCKDHBP21953 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BCKDHBP21953 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 KRT8P49-201ENST00000604166 1432 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
BCKDHBP21953 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 HLA-V-201ENST00000429037 534 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 U91328.1-201ENST00000437528 223 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.57■□□□□ 0.24
BCKDHBP21953 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 MIR4492-201ENST00000581627 80 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.57■□□□□ 0.24
BCKDHBP21953 TEX28P1-201ENST00000613479 1221 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 TEX28P2-201ENST00000617764 1221 ntBASIC16.57■□□□□ 0.24
BCKDHBP21953 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.57■□□□□ 0.24
BCKDHBP21953 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
BCKDHBP21953 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BCKDHBP21953 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.56■□□□□ 0.24
BCKDHBP21953 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 CU639417.3-201ENST00000624240 1404 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.56■□□□□ 0.24
BCKDHBP21953 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 HLA-H-201ENST00000383620 1096 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.56■□□□□ 0.24
BCKDHBP21953 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.56■□□□□ 0.24
BCKDHBP21953 MTND6P24-201ENST00000440466 518 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 ATP5G2P4-201ENST00000442175 420 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 PRYP6-201ENST00000514804 343 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.56■□□□□ 0.24
BCKDHBP21953 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.56■□□□□ 0.24
BCKDHBP21953 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.56■□□□□ 0.24
BCKDHBP21953 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.56■□□□□ 0.24
BCKDHBP21953 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.56■□□□□ 0.24
BCKDHBP21953 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.56■□□□□ 0.24
BCKDHBP21953 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.56■□□□□ 0.24
BCKDHBP21953 AL132655.2-201ENST00000596276 594 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 AL844908.2-201ENST00000609461 460 ntBASIC16.56■□□□□ 0.24
BCKDHBP21953 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.56■□□□□ 0.24
BCKDHBP21953 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BCKDHBP21953 FRMD8P1-201ENST00000440433 1524 ntBASIC16.55■□□□□ 0.24
BCKDHBP21953 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.55■□□□□ 0.24
BCKDHBP21953 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.55■□□□□ 0.24
BCKDHBP21953 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.55■□□□□ 0.24
BCKDHBP21953 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.55■□□□□ 0.24
BCKDHBP21953 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.55■□□□□ 0.24
BCKDHBP21953 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BCKDHBP21953 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BCKDHBP21953 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
BCKDHBP21953 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
BCKDHBP21953 ARSEP1-201ENST00000420443 635 ntBASIC16.55■□□□□ 0.24
BCKDHBP21953 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms