Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPRFP10586 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PTPRFP10586 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPRFP10586 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPRFP10586 GPR53P-205ENST00000457298 1084 ntBASIC19.11■□□□□ 0.65
PTPRFP10586 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPRFP10586 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PTPRFP10586 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.11■□□□□ 0.65
PTPRFP10586 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTPRFP10586 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
PTPRFP10586 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPRFP10586 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPRFP10586 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPRFP10586 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
PTPRFP10586 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPRFP10586 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 TMEM14DP-201ENST00000422205 345 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 DFFBP1-201ENST00000433250 979 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPRFP10586 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPRFP10586 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPRFP10586 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.1■□□□□ 0.65
PTPRFP10586 CHCHD2P3-201ENST00000603038 451 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTPRFP10586 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 KRT8P39-201ENST00000396270 1433 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 AC138969.3-201ENST00000546612 1459 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 AC138932.2-201ENST00000548268 1459 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 AC126755.4-201ENST00000549796 1459 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPRFP10586 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PTPRFP10586 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTPRFP10586 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PTPRFP10586 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.1■□□□□ 0.65
PTPRFP10586 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.1■□□□□ 0.65
PTPRFP10586 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.1■□□□□ 0.65
PTPRFP10586 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PTPRFP10586 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPRFP10586 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPRFP10586 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PTPRFP10586 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPRFP10586 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPRFP10586 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPRFP10586 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPRFP10586 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPRFP10586 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.08■□□□□ 0.65
PTPRFP10586 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPRFP10586 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPRFP10586 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.08■□□□□ 0.65
PTPRFP10586 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPRFP10586 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPRFP10586 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPRFP10586 RN7SL618P-201ENST00000477850 296 ntBASIC19.08■□□□□ 0.65
PTPRFP10586 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.08■□□□□ 0.65
PTPRFP10586 AC055876.2-201ENST00000531834 546 ntBASIC19.08■□□□□ 0.65
PTPRFP10586 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPRFP10586 AC044860.1-202ENST00000559481 777 ntBASIC19.08■□□□□ 0.65
PTPRFP10586 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.08■□□□□ 0.65
PTPRFP10586 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPRFP10586 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PTPRFP10586 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PTPRFP10586 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPRFP10586 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPRFP10586 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPRFP10586 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PTPRFP10586 AC006277.1-201ENST00000624348 1610 ntBASIC19.08■□□□□ 0.64
PTPRFP10586 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPRFP10586 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPRFP10586 SPDYE19P-201ENST00000338590 713 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms