Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 HMGA1P7-201ENST00000406908 502 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SPDYE11-202ENST00000450699 704 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SPDYE9P-201ENST00000570642 692 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SPDYE10P-202ENST00000612005 668 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SPDYE8P-202ENST00000612377 668 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AC093028.1-201ENST00000622998 982 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 EGFEM1P-202ENST00000431685 1563 ntBASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.91■□□□□ 0.14
RAB40ALP0C0E4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 HCG4-201ENST00000418983 998 ntBASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 RARRES2P8-201ENST00000566335 367 ntBASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 AD000864.1-201ENST00000624076 2295 ntBASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RAB40ALP0C0E4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 TFAMP1-201ENST00000412727 736 ntBASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 AL627223.1-201ENST00000416693 442 ntBASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB40ALP0C0E4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms