Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PCDHB19P-201ENST00000570871 2371 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 UBALD1-205ENST00000590891 2641 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT6AP02538 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 BX005266.1-201ENST00000473402 457 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT6AP02538 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT6AP02538 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 AL353135.1-201ENST00000606729 504 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 AL139288.1-201ENST00000623748 933 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT6AP02538 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
KRT6AP02538 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
KRT6AP02538 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 AL645728.1-201ENST00000366221 2101 ntBASIC16.42■□□□□ 0.22
KRT6AP02538 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT6AP02538 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT6AP02538 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KRT6AP02538 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 MIR1224-201ENST00000408193 85 ntBASIC16.41■□□□□ 0.22
KRT6AP02538 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT6AP02538 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6AP02538 DUX4L17-201ENST00000557360 1267 ntBASIC16.41■□□□□ 0.22
KRT6AP02538 MIR3652-201ENST00000579335 131 ntBASIC16.41■□□□□ 0.22
KRT6AP02538 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6AP02538 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
KRT6AP02538 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT6AP02538 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT6AP02538 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT6AP02538 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT6AP02538 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6AP02538 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6AP02538 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 AC243591.1-201ENST00000452967 1364 ntBASIC16.4■□□□□ 0.22
KRT6AP02538 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 AL391256.1-201ENST00000443260 1855 ntBASIC16.4■□□□□ 0.22
KRT6AP02538 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT6AP02538 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT6AP02538 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT6AP02538 UPK3BP1-201ENST00000428678 509 ntBASIC16.4■□□□□ 0.22
KRT6AP02538 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT6AP02538 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT6AP02538 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms