Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.24■□□□□ 0.03
PTP4A3O75365 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.24■□□□□ 0.03
PTP4A3O75365 AL589182.2-201ENST00000619332 1049 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 TOP3BP1-201ENST00000420768 1380 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 PKD1P1-201ENST00000458669 6805 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.23■□□□□ 0.03
PTP4A3O75365 FOSL1P1-201ENST00000511041 816 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 AL139424.1-201ENST00000607572 797 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 AL139288.1-201ENST00000623748 933 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 LINC02199-201ENST00000506655 2702 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
PTP4A3O75365 SNX33P1-201ENST00000592116 1762 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTP4A3O75365 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PTP4A3O75365 PCDHA1-201ENST00000378133 2726 ntBASIC15.23■□□□□ 0.03
PTP4A3O75365 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PTP4A3O75365 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.22■□□□□ 0.03
PTP4A3O75365 MTDHP3-201ENST00000594186 672 ntBASIC15.22■□□□□ 0.03
PTP4A3O75365 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.22■□□□□ 0.03
PTP4A3O75365 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.22■□□□□ 0.03
PTP4A3O75365 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PTP4A3O75365 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.22■□□□□ 0.03
PTP4A3O75365 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms