Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.22■□□□□ 0.19
GFRA3O60609 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GFRA3O60609 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
GFRA3O60609 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GFRA3O60609 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
GFRA3O60609 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GFRA3O60609 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 AL162726.2-201ENST00000438986 1017 ntBASIC16.21■□□□□ 0.19
GFRA3O60609 AC005077.2-201ENST00000449786 690 ntBASIC16.21■□□□□ 0.19
GFRA3O60609 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 AC079316.1-201ENST00000548397 411 ntBASIC16.21■□□□□ 0.19
GFRA3O60609 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC16.21■□□□□ 0.19
GFRA3O60609 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 AC091167.2-201ENST00000579581 588 ntBASIC16.21■□□□□ 0.19
GFRA3O60609 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.21■□□□□ 0.19
GFRA3O60609 RN7SL275P-201ENST00000582762 335 ntBASIC16.21■□□□□ 0.19
GFRA3O60609 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GFRA3O60609 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.21■□□□□ 0.19
GFRA3O60609 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GFRA3O60609 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.21■□□□□ 0.19
GFRA3O60609 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GFRA3O60609 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
GFRA3O60609 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
GFRA3O60609 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
GFRA3O60609 SLC22A20-204ENST00000530038 1673 ntBASIC16.21■□□□□ 0.18
GFRA3O60609 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GFRA3O60609 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.2■□□□□ 0.18
GFRA3O60609 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
GFRA3O60609 KRT8P22-201ENST00000562317 1415 ntBASIC16.2■□□□□ 0.18
GFRA3O60609 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GFRA3O60609 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
GFRA3O60609 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.2■□□□□ 0.18
GFRA3O60609 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
GFRA3O60609 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.2■□□□□ 0.18
GFRA3O60609 ACTG1P3-201ENST00000431775 1114 ntBASIC16.2■□□□□ 0.18
GFRA3O60609 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.2■□□□□ 0.18
GFRA3O60609 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.2■□□□□ 0.18
GFRA3O60609 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.2■□□□□ 0.18
GFRA3O60609 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
GFRA3O60609 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 TMEM14EP-202ENST00000639378 1296 ntBASIC16.2■□□□□ 0.18
GFRA3O60609 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.2■□□□□ 0.18
GFRA3O60609 KRT8P19-201ENST00000551916 1455 ntBASIC16.2■□□□□ 0.18
GFRA3O60609 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.2■□□□□ 0.18
GFRA3O60609 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GFRA3O60609 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.19■□□□□ 0.18
GFRA3O60609 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 NOC2LP1-202ENST00000452600 2235 ntBASIC16.19■□□□□ 0.18
GFRA3O60609 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GFRA3O60609 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GFRA3O60609 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms