Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
LCMT2O60294 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCMT2O60294 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.15■□□□□ 0.18
LCMT2O60294 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.15■□□□□ 0.18
LCMT2O60294 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LCMT2O60294 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LCMT2O60294 AL671883.3-201ENST00000603274 991 ntBASIC16.15■□□□□ 0.18
LCMT2O60294 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.15■□□□□ 0.18
LCMT2O60294 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCMT2O60294 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LCMT2O60294 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LCMT2O60294 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
LCMT2O60294 AL603756.1-201ENST00000606511 2163 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LCMT2O60294 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 AC131009.4-201ENST00000624048 1740 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 MIR940-201ENST00000401276 94 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 RHOQP3-201ENST00000437982 621 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 AC096734.2-201ENST00000562054 433 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 AC018845.2-201ENST00000568326 409 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 AC027601.4-201ENST00000611259 610 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.14■□□□□ 0.17
LCMT2O60294 AC010507.1-201ENST00000633895 436 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 LINC00895-201ENST00000629028 1637 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
LCMT2O60294 AL353732.1-201ENST00000569618 1459 ntBASIC16.14■□□□□ 0.17
LCMT2O60294 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.14■□□□□ 0.17
LCMT2O60294 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LCMT2O60294 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LCMT2O60294 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.14■□□□□ 0.17
LCMT2O60294 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LCMT2O60294 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LCMT2O60294 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.13■□□□□ 0.17
LCMT2O60294 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LCMT2O60294 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms