Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.01■□□□□ 0.31
SMAD6O43541 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMAD6O43541 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.01■□□□□ 0.31
SMAD6O43541 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SMAD6O43541 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.01■□□□□ 0.31
SMAD6O43541 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
SMAD6O43541 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMAD6O43541 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SMAD6O43541 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17■□□□□ 0.31
SMAD6O43541 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 AC105020.1-201ENST00000435356 2205 ntBASIC17■□□□□ 0.31
SMAD6O43541 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 STOM-202ENST00000347359 870 ntTSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 AC254562.1-201ENST00000417586 456 ntBASIC17■□□□□ 0.31
SMAD6O43541 CDK2AP2P3-201ENST00000422476 372 ntBASIC17■□□□□ 0.31
SMAD6O43541 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 AL391256.1-201ENST00000443260 1855 ntBASIC17■□□□□ 0.31
SMAD6O43541 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17■□□□□ 0.31
SMAD6O43541 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 AC013467.2-201ENST00000605472 835 ntBASIC17■□□□□ 0.31
SMAD6O43541 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17■□□□□ 0.31
SMAD6O43541 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 AC105339.1-204ENST00000636249 355 ntBASIC17■□□□□ 0.31
SMAD6O43541 AC079781.4-201ENST00000641908 219 ntBASIC17■□□□□ 0.31
SMAD6O43541 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17■□□□□ 0.31
SMAD6O43541 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17■□□□□ 0.31
SMAD6O43541 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SMAD6O43541 SNX33P1-201ENST00000592116 1762 ntBASIC17■□□□□ 0.31
SMAD6O43541 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMAD6O43541 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 LINC00895-201ENST00000629028 1637 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD6O43541 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SMAD6O43541 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SMAD6O43541 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD6O43541 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD6O43541 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD6O43541 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.99■□□□□ 0.31
SMAD6O43541 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 CNN2P11-201ENST00000429351 262 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD6O43541 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD6O43541 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMAD6O43541 KRT8P48-201ENST00000515599 1220 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 AC109635.5-201ENST00000533593 962 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.99■□□□□ 0.31
SMAD6O43541 SNHG9-202ENST00000564014 471 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.99■□□□□ 0.31
SMAD6O43541 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.99■□□□□ 0.31
SMAD6O43541 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.99■□□□□ 0.31
SMAD6O43541 AL513210.1-201ENST00000629608 234 ntBASIC16.99■□□□□ 0.31
SMAD6O43541 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMAD6O43541 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms