Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.76□□□□□ -0.37
SOCS3O14543 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.76□□□□□ -0.37
SOCS3O14543 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SOCS3O14543 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SOCS3O14543 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 LAGE3P1-201ENST00000425356 484 ntBASIC12.75□□□□□ -0.37
SOCS3O14543 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.75□□□□□ -0.37
SOCS3O14543 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 HLA-J-202ENST00000469281 1241 ntBASIC12.75□□□□□ -0.37
SOCS3O14543 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.75□□□□□ -0.37
SOCS3O14543 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.75□□□□□ -0.37
SOCS3O14543 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.75□□□□□ -0.37
SOCS3O14543 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.75□□□□□ -0.37
SOCS3O14543 AC021087.4-201ENST00000563761 564 ntBASIC12.75□□□□□ -0.37
SOCS3O14543 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 IFNL4P1-201ENST00000607083 540 ntBASIC12.75□□□□□ -0.37
SOCS3O14543 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.75□□□□□ -0.37
SOCS3O14543 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SOCS3O14543 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SOCS3O14543 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.74□□□□□ -0.37
SOCS3O14543 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
SOCS3O14543 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 AC006277.1-201ENST00000624348 1610 ntBASIC12.74□□□□□ -0.37
SOCS3O14543 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SOCS3O14543 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 TOP3BP1-201ENST00000420768 1380 ntBASIC12.74□□□□□ -0.37
SOCS3O14543 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 UBALD1-205ENST00000590891 2641 ntBASIC12.74□□□□□ -0.37
SOCS3O14543 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.74□□□□□ -0.37
SOCS3O14543 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 ELK2BP-201ENST00000415014 1224 ntBASIC12.74□□□□□ -0.37
SOCS3O14543 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.74□□□□□ -0.37
SOCS3O14543 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.74□□□□□ -0.37
SOCS3O14543 LINC01711-201ENST00000598340 967 ntBASIC12.74□□□□□ -0.37
SOCS3O14543 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.74□□□□□ -0.37
SOCS3O14543 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SOCS3O14543 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms