Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 FAM58CP-201ENST00000435741 640 ntBASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NPIPA2E9PIF3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AC254562.1-201ENST00000417586 456 ntBASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 CNN2P11-201ENST00000429351 262 ntBASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AL513480.1-201ENST00000451731 511 ntBASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 AC108860.2-201ENST00000562760 2183 ntBASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 KRT18P28-201ENST00000453838 1332 ntBASIC15.4■□□□□ 0.06
NPIPA2E9PIF3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 METTL21AP1-201ENST00000438852 635 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 FAM185BP-201ENST00000443595 716 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PAWRP1-201ENST00000451083 565 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AL031432.2-201ENST00000566714 459 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AL928711.1-201ENST00000570165 459 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AC027796.2-201ENST00000575326 344 ntBASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPA2E9PIF3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms