Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
HFM1A2PYH4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC24.75■■□□□ 1.55
HFM1A2PYH4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HFM1A2PYH4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HFM1A2PYH4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
HFM1A2PYH4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HFM1A2PYH4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HFM1A2PYH4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.74■■□□□ 1.55
HFM1A2PYH4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HFM1A2PYH4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
HFM1A2PYH4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 AC093724.1-201ENST00000448659 1027 ntBASIC24.72■■□□□ 1.55
HFM1A2PYH4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
HFM1A2PYH4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HFM1A2PYH4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 AL645939.2-201ENST00000427340 991 ntBASIC24.71■■□□□ 1.55
HFM1A2PYH4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 AC051619.7-201ENST00000568314 623 ntBASIC24.71■■□□□ 1.55
HFM1A2PYH4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HFM1A2PYH4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
HFM1A2PYH4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
HFM1A2PYH4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
HFM1A2PYH4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
HFM1A2PYH4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
HFM1A2PYH4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms