Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 AC105020.1-201ENST00000435356 2205 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 NCF1C-201ENST00000438382 1427 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TSPY19P-201ENST00000418461 509 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TSPY18P-201ENST00000441642 509 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SCARNA2-201ENST00000458748 420 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 KRT18P56-201ENST00000507275 550 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 NKAPP1-205ENST00000585790 367 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 CLEC4GP1-201ENST00000596555 870 ntBASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV1A0A0A0MS02 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 AC084018.2-201ENST00000613093 2607 ntBASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 AC012313.10-201ENST00000623509 926 ntBASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV1A0A0A0MS02 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms