Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 BNIP3P42-201ENST00000454982 569 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 AL079307.3-201ENST00000556114 283 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 BNIP3P29-201ENST00000598302 571 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 AL133215.2-201ENST00000609242 977 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 AC011447.5-201ENST00000616168 564 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 MIR6787-201ENST00000616675 61 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 AL109936.8-201ENST00000641772 604 ntBASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTCH2Q9Y6C5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTCH2Q9Y6C5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.89■□□□□ 0.62
PTCH2Q9Y6C5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTCH2Q9Y6C5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTCH2Q9Y6C5 AC135050.7-201ENST00000624508 2218 ntBASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AL354751.1-201ENST00000412768 1863 ntBASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AC055876.2-201ENST00000531834 546 ntBASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
PTCH2Q9Y6C5 AC138028.4-201ENST00000564984 1845 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 HAUS4P1-201ENST00000406739 1145 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AC004945.1-201ENST00000416738 983 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 RN7SL618P-201ENST00000477850 296 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 PRYP6-201ENST00000514804 343 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AC044860.1-202ENST00000559481 777 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AC021097.1-201ENST00000607902 574 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 AC131009.4-201ENST00000624048 1740 ntBASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCH2Q9Y6C5 LINC00896-202ENST00000609602 2128 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms