Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 TOP3BP1-201ENST00000420768 1380 ntBASIC19.3■□□□□ 0.68
CLIC4Q9Y696 AC002310.6-201ENST00000624451 1377 ntBASIC19.3■□□□□ 0.68
CLIC4Q9Y696 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC4Q9Y696 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 AC087163.2-201ENST00000457299 853 ntBASIC19.29■□□□□ 0.68
CLIC4Q9Y696 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC4Q9Y696 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 AL391005.1-201ENST00000623953 2435 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 SCARNA2-201ENST00000458748 420 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 SLC25A6P2-201ENST00000497974 877 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 IFNL4P1-201ENST00000607083 540 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 REXO1L3P-201ENST00000622202 1288 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 AC026691.1-201ENST00000602502 2017 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 AC008741.2-201ENST00000612792 3115 ntBASIC19.28■□□□□ 0.68
CLIC4Q9Y696 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIC4Q9Y696 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLIC4Q9Y696 AL671710.1-201ENST00000610245 2349 ntBASIC19.27■□□□□ 0.68
CLIC4Q9Y696 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms