Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 AC079328.2-201ENST00000561241 3354 ntBASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 AC026691.1-201ENST00000602502 2017 ntBASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.87□□□□□ -0.03
RHBDD3Q9Y3P4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 AC046158.3-201ENST00000624947 2558 ntBASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 ABCD1P5-201ENST00000445663 754 ntBASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 KRT16P4-201ENST00000453883 522 ntBASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 FOSL1P1-201ENST00000511041 816 ntBASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.86□□□□□ -0.03
RHBDD3Q9Y3P4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 AC148477.5-201ENST00000625164 1645 ntBASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 AL020989.1-201ENST00000422979 469 ntBASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 HCG4P8-203ENST00000443049 980 ntBASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 FRMD8P1-201ENST00000440433 1524 ntBASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RHBDD3Q9Y3P4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RHBDD3Q9Y3P4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms