Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 GAPDHP21-201ENST00000450301 1010 ntBASIC22.96■■□□□ 1.27
NINLQ9Y2I6 KRT18P34-201ENST00000488218 1270 ntBASIC22.96■■□□□ 1.27
NINLQ9Y2I6 AC069262.1-201ENST00000539058 672 ntBASIC22.96■■□□□ 1.27
NINLQ9Y2I6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.96■■□□□ 1.27
NINLQ9Y2I6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 AC141586.5-201ENST00000624546 2050 ntBASIC22.96■■□□□ 1.27
NINLQ9Y2I6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
NINLQ9Y2I6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC22.95■■□□□ 1.27
NINLQ9Y2I6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC22.95■■□□□ 1.27
NINLQ9Y2I6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
NINLQ9Y2I6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 SLC25A39P2-201ENST00000537614 270 ntBASIC22.94■■□□□ 1.26
NINLQ9Y2I6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 AJ011932.1-201ENST00000621707 465 ntBASIC22.94■■□□□ 1.26
NINLQ9Y2I6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NINLQ9Y2I6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 KRT8P39-201ENST00000396270 1433 ntBASIC22.93■■□□□ 1.26
NINLQ9Y2I6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 RBPMS2P1-201ENST00000437762 623 ntBASIC22.93■■□□□ 1.26
NINLQ9Y2I6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 AC026150.2-201ENST00000564693 1156 ntBASIC22.93■■□□□ 1.26
NINLQ9Y2I6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 AL645608.8-201ENST00000606034 2086 ntBASIC22.93■■□□□ 1.26
NINLQ9Y2I6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NINLQ9Y2I6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC22.92■■□□□ 1.26
NINLQ9Y2I6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NINLQ9Y2I6 UXT-AS1-201ENST00000590504 1525 ntBASIC22.92■■□□□ 1.26
NINLQ9Y2I6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
NINLQ9Y2I6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC22.92■■□□□ 1.26
NINLQ9Y2I6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms