Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 AL603756.1-201ENST00000606511 2163 ntBASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM248Q9NWD8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 RNU1-129P-201ENST00000384064 167 ntBASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 MCCD1P2-201ENST00000423228 335 ntBASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 U1.21-201ENST00000580816 167 ntBASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AC068137.2-201ENST00000605408 478 ntBASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 PRORSD1P-202ENST00000563365 2154 ntBASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TMEM248Q9NWD8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 AC140658.5-201ENST00000438532 169 ntBASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 MIR3909-201ENST00000579518 119 ntBASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM248Q9NWD8 AL671710.1-201ENST00000610245 2349 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms