Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 MCCD1P2-201ENST00000423228 335 ntBASIC19.9■□□□□ 0.78
RNF41Q9H4P4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.9■□□□□ 0.78
RNF41Q9H4P4 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF41Q9H4P4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF41Q9H4P4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
RNF41Q9H4P4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 AC068137.2-201ENST00000605408 478 ntBASIC19.89■□□□□ 0.77
RNF41Q9H4P4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 AL139011.1-202ENST00000642063 584 ntBASIC19.89■□□□□ 0.77
RNF41Q9H4P4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF41Q9H4P4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 AL645728.1-201ENST00000366221 2101 ntBASIC19.88■□□□□ 0.77
RNF41Q9H4P4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.88■□□□□ 0.77
RNF41Q9H4P4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 DNAJB3-201ENST00000446806 729 ntBASIC19.88■□□□□ 0.77
RNF41Q9H4P4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 MTDHP5-201ENST00000598980 586 ntBASIC19.88■□□□□ 0.77
RNF41Q9H4P4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF41Q9H4P4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 AC080080.1-201ENST00000625121 2420 ntBASIC19.87■□□□□ 0.77
RNF41Q9H4P4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms