Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ABCA3Q99758 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ABCA3Q99758 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCA3Q99758 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ABCA3Q99758 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC22.09■■□□□ 1.13
ABCA3Q99758 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC22.09■■□□□ 1.13
ABCA3Q99758 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCA3Q99758 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.09■■□□□ 1.13
ABCA3Q99758 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC22.09■■□□□ 1.13
ABCA3Q99758 AC124947.2-201ENST00000547118 1133 ntBASIC22.09■■□□□ 1.13
ABCA3Q99758 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC22.09■■□□□ 1.13
ABCA3Q99758 MIR8072-201ENST00000614241 80 ntBASIC22.09■■□□□ 1.13
ABCA3Q99758 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
ABCA3Q99758 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC22.08■■□□□ 1.13
ABCA3Q99758 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCA3Q99758 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
ABCA3Q99758 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCA3Q99758 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCA3Q99758 BX323043.1-201ENST00000641006 1765 ntBASIC22.08■■□□□ 1.13
ABCA3Q99758 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCA3Q99758 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCA3Q99758 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCA3Q99758 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCA3Q99758 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA3Q99758 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC099336.1-201ENST00000417053 1171 ntBASIC22.08■■□□□ 1.12
ABCA3Q99758 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC22.08■■□□□ 1.12
ABCA3Q99758 PAM16-204ENST00000571941 674 ntTSL 3 BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.08■■□□□ 1.12
ABCA3Q99758 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA3Q99758 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC074044.1-201ENST00000609673 707 ntBASIC22.08■■□□□ 1.12
ABCA3Q99758 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC22.08■■□□□ 1.12
ABCA3Q99758 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.08■■□□□ 1.12
ABCA3Q99758 AC009113.1-201ENST00000570267 2443 ntBASIC22.08■■□□□ 1.12
ABCA3Q99758 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
ABCA3Q99758 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.08■■□□□ 1.12
ABCA3Q99758 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ABCA3Q99758 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC22.07■■□□□ 1.12
ABCA3Q99758 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC22.07■■□□□ 1.12
ABCA3Q99758 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
ABCA3Q99758 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ABCA3Q99758 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.07■■□□□ 1.12
ABCA3Q99758 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC22.07■■□□□ 1.12
ABCA3Q99758 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC22.07■■□□□ 1.12
ABCA3Q99758 AC025048.3-201ENST00000590609 569 ntBASIC22.07■■□□□ 1.12
ABCA3Q99758 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC22.07■■□□□ 1.12
ABCA3Q99758 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
ABCA3Q99758 AC005702.4-201ENST00000618393 416 ntBASIC22.07■■□□□ 1.12
ABCA3Q99758 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
ABCA3Q99758 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ABCA3Q99758 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ABCA3Q99758 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.07■■□□□ 1.12
ABCA3Q99758 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
ABCA3Q99758 SLC25A24-204ENST00000569674 2357 ntBASIC22.07■■□□□ 1.12
ABCA3Q99758 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
ABCA3Q99758 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC22.06■■□□□ 1.12
ABCA3Q99758 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC22.06■■□□□ 1.12
ABCA3Q99758 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 AC016396.2-201ENST00000562575 1417 ntBASIC22.06■■□□□ 1.12
ABCA3Q99758 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ABCA3Q99758 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 TMEM261P1-201ENST00000604899 340 ntBASIC22.06■■□□□ 1.12
ABCA3Q99758 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.06■■□□□ 1.12
ABCA3Q99758 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ABCA3Q99758 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ABCA3Q99758 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.05■■□□□ 1.12
ABCA3Q99758 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC22.05■■□□□ 1.12
ABCA3Q99758 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ABCA3Q99758 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ABCA3Q99758 AL158212.4-201ENST00000624062 1286 ntBASIC22.05■■□□□ 1.12
ABCA3Q99758 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC22.05■■□□□ 1.12
ABCA3Q99758 BICD1-207ENST00000551848 1962 ntBASIC22.04■■□□□ 1.12
ABCA3Q99758 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.04■■□□□ 1.12
ABCA3Q99758 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ABCA3Q99758 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms