Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 AC026120.1-201ENST00000611536 926 ntBASIC16.37■□□□□ 0.21
SLC38A3Q99624 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC38A3Q99624 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC38A3Q99624 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC38A3Q99624 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC38A3Q99624 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC38A3Q99624 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC38A3Q99624 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC139713.2-201ENST00000641328 2723 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SLC25A1P3-201ENST00000395415 828 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AL355306.1-201ENST00000415580 579 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SPDYE11-202ENST00000450699 704 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SPDYE9P-201ENST00000570642 692 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC022145.2-201ENST00000598203 171 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC027612.4-201ENST00000605371 583 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 SPDYE10P-202ENST00000612005 668 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 SPDYE8P-202ENST00000612377 668 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 AL161645.1-201ENST00000622716 1255 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 AP001350.2-201ENST00000625104 1094 ntBASIC16.36■□□□□ 0.21
SLC38A3Q99624 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC38A3Q99624 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SLC38A3Q99624 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 TSEN15P1-201ENST00000423257 515 ntBASIC16.35■□□□□ 0.21
SLC38A3Q99624 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 AC099522.2-201ENST00000607001 744 ntBASIC16.35■□□□□ 0.21
SLC38A3Q99624 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 AC068880.1-201ENST00000507289 2297 ntBASIC16.35■□□□□ 0.21
SLC38A3Q99624 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC38A3Q99624 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC38A3Q99624 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SLC38A3Q99624 CROCCP2-202ENST00000412962 2773 ntBASIC16.34■□□□□ 0.21
SLC38A3Q99624 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms