Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA3Q99618 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDCA3Q99618 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 GNAQP1-201ENST00000444815 1067 ntBASIC17.41■□□□□ 0.38
CDCA3Q99618 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA3Q99618 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA3Q99618 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA3Q99618 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDCA3Q99618 AC108860.2-201ENST00000562760 2183 ntBASIC17.4■□□□□ 0.38
CDCA3Q99618 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDCA3Q99618 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.4■□□□□ 0.38
CDCA3Q99618 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 RPS2P32-201ENST00000439199 892 ntBASIC17.4■□□□□ 0.38
CDCA3Q99618 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.4■□□□□ 0.38
CDCA3Q99618 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.4■□□□□ 0.38
CDCA3Q99618 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDCA3Q99618 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA3Q99618 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.4■□□□□ 0.38
CDCA3Q99618 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 BICD1-207ENST00000551848 1962 ntBASIC17.4■□□□□ 0.38
CDCA3Q99618 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDCA3Q99618 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA3Q99618 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA3Q99618 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.39■□□□□ 0.38
CDCA3Q99618 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDCA3Q99618 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDCA3Q99618 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 SPDYE19P-201ENST00000338590 713 ntBASIC17.39■□□□□ 0.37
CDCA3Q99618 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDCA3Q99618 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CDCA3Q99618 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
CDCA3Q99618 MEP1AP4-201ENST00000423244 1087 ntBASIC17.39■□□□□ 0.37
CDCA3Q99618 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 AC055876.2-201ENST00000531834 546 ntBASIC17.39■□□□□ 0.37
CDCA3Q99618 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA3Q99618 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDCA3Q99618 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.39■□□□□ 0.37
CDCA3Q99618 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA3Q99618 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDCA3Q99618 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.37
CDCA3Q99618 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDCA3Q99618 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA3Q99618 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms