Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AL080243.2-201ENST00000418783 582 ntBASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 U91328.1-201ENST00000437528 223 ntBASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AL079307.3-201ENST00000556114 283 ntBASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 MIR6752-201ENST00000618442 71 ntBASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.46■□□□□ 0.87
CRAMP1Q96RY5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 BTBD7P1-201ENST00000447253 1453 ntBASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 AC140912.1-201ENST00000577171 1054 ntBASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 AC006277.1-201ENST00000624348 1610 ntBASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRAMP1Q96RY5 LINC02012-201ENST00000608206 1725 ntBASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 ARSEP1-201ENST00000420443 635 ntBASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRAMP1Q96RY5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 AC098614.1-201ENST00000368528 745 ntBASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 RNA5SP410-201ENST00000516285 106 ntBASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 AL671710.1-201ENST00000610245 2349 ntBASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRAMP1Q96RY5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms