Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 FOXO1B-201ENST00000504678 1527 ntBASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AL080243.2-201ENST00000418783 582 ntBASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MYCLP2-201ENST00000449268 967 ntBASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 IGHJ2P-201ENST00000454480 60 ntBASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 USP32P1-208ENST00000506594 1164 ntBASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 RARRES2P9-201ENST00000565168 469 ntBASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MIR4722-201ENST00000578292 60 ntBASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CSMD1Q96PZ7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 AC010319.3-201ENST00000597028 470 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 AC068880.1-201ENST00000507289 2297 ntBASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CSMD1Q96PZ7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms