Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A1Q96NT5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC46A1Q96NT5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC46A1Q96NT5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 MIR661-201ENST00000384842 89 ntBASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 LINC01225-203ENST00000563550 1244 ntBASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A1Q96NT5 FO538757.1-201ENST00000623083 1397 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 HMGA1P7-201ENST00000406908 502 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 SPDYE7P-202ENST00000420373 878 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 UGT1A2P-201ENST00000454886 866 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 SLC25A39P2-201ENST00000537614 270 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AC026150.2-201ENST00000564693 1156 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AC084121.4-201ENST00000641598 221 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AF228730.8-201ENST00000642140 221 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AC005332.8-201ENST00000622750 2735 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 AC008677.1-201ENST00000519230 1561 ntBASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC46A1Q96NT5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 GK-202ENST00000378941 458 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 TREML5P-201ENST00000421694 576 ntBASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC46A1Q96NT5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms