Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 AC060834.1-201ENST00000443027 2032 ntBASIC18.18■□□□□ 0.5
SNX27Q96L92 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 AP000344.2-201ENST00000512987 629 ntBASIC18.18■□□□□ 0.5
SNX27Q96L92 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 MIR3909-201ENST00000579518 119 ntBASIC18.18■□□□□ 0.5
SNX27Q96L92 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
SNX27Q96L92 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX27Q96L92 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.18■□□□□ 0.5
SNX27Q96L92 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX27Q96L92 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 AC105339.1-204ENST00000636249 355 ntBASIC18.18■□□□□ 0.5
SNX27Q96L92 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.18■□□□□ 0.5
SNX27Q96L92 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX27Q96L92 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SNX27Q96L92 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX27Q96L92 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.17■□□□□ 0.5
SNX27Q96L92 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX27Q96L92 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX27Q96L92 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX27Q96L92 AC022145.2-201ENST00000598203 171 ntBASIC18.17■□□□□ 0.5
SNX27Q96L92 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX27Q96L92 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX27Q96L92 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX27Q96L92 AC106820.2-201ENST00000563775 3264 ntBASIC18.17■□□□□ 0.5
SNX27Q96L92 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SNX27Q96L92 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
SNX27Q96L92 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX27Q96L92 AL671277.1-201ENST00000429656 993 ntBASIC18.16■□□□□ 0.5
SNX27Q96L92 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX27Q96L92 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX27Q96L92 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.16■□□□□ 0.5
SNX27Q96L92 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX27Q96L92 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX27Q96L92 RARRES2P8-201ENST00000566335 367 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms