Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 AC093004.1-201ENST00000508850 424 ntBASIC16.94■□□□□ 0.3
SHDQ96IW2 ZNF890P-202ENST00000530367 1156 ntBASIC16.94■□□□□ 0.3
SHDQ96IW2 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHDQ96IW2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 KRT8P49-201ENST00000604166 1432 ntBASIC16.94■□□□□ 0.3
SHDQ96IW2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.94■□□□□ 0.3
SHDQ96IW2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SHDQ96IW2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.93■□□□□ 0.3
SHDQ96IW2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.93■□□□□ 0.3
SHDQ96IW2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SHDQ96IW2 AC010336.2-201ENST00000564226 506 ntBASIC16.93■□□□□ 0.3
SHDQ96IW2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SHDQ96IW2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 IGHV3-72-202ENST00000621503 303 ntBASIC16.93■□□□□ 0.3
SHDQ96IW2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SHDQ96IW2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SHDQ96IW2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHDQ96IW2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SHDQ96IW2 LINC00895-201ENST00000629028 1637 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHDQ96IW2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.92■□□□□ 0.3
SHDQ96IW2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHDQ96IW2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SHDQ96IW2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 ACA64.2-201ENST00000459014 129 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 AC098859.1-201ENST00000502915 1238 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.92■□□□□ 0.3
SHDQ96IW2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SHDQ96IW2 LINC00896-202ENST00000609602 2128 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 AC090164.3-201ENST00000610780 2143 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 AC004840.1-201ENST00000636359 365 ntBASIC16.92■□□□□ 0.3
SHDQ96IW2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
SHDQ96IW2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHDQ96IW2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SHDQ96IW2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
SHDQ96IW2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.91■□□□□ 0.3
SHDQ96IW2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHDQ96IW2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms